Research workbench
AlphaFold monomer V2.0 prediction for merozoite surface protein 1 (P19598)
Analyse AlphaFold monomer V2.0 prediction for merozoite surface protein 1 (P19598) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P19598
- Type
- protein
- Length
- 1,682 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Merozoite surface protein 1
- UniProt
- P19598
- Pockets
- 20 · best druggability 0.79
Structure
1 distinct chain · 61% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Merozoite surface protein 1 | protein | 1682 | 61% helix, 3% strand | P19598 |
Pockets
20 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1143 | 0.79 | 0.81 | 98 | empty |
| 2 | 1006 | 0.74 | 0.76 | 56 | empty |
| 3 | 1016 | 0.73 | 0.76 | 71 | empty |
| 4 | 340 | 0.66 | 0.80 | 26 | empty |
| 5 | 334 | 0.64 | 0.79 | 45 | empty |
Modifications
Observed in the structure: 8 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P19598
- Elsewhere: UniProt P19598 · AlphaFold DB P19598
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