Research workbench
AlphaFold monomer V2.0 prediction for mesothelin-like protein (Q96KJ4)
Analyse AlphaFold monomer V2.0 prediction for mesothelin-like protein (Q96KJ4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q96KJ4
- Type
- protein
- Length
- 702 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x75Df960C661B7e1bea7f29d8515634A513c49140
- Molecule
- Mesothelin-like protein
- UniProt
- Q96KJ4
- Pockets
- 8 · best druggability 0.67
Structure
1 distinct chain · 50% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mesothelin-like protein | protein | 702 | 50% helix, 0% strand | Q96KJ4 |
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 619 | 0.67 | 0.76 | 53 | empty |
| 2 | 125 | 0.47 | 0.79 | 25 | empty |
| 3 | 73 | 0.44 | 0.81 | 25 | empty |
| 4 | 96 | 0.42 | 0.78 | 19 | empty |
| 5 | 143 | 0.39 | 0.73 | 25 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96KJ4
- Elsewhere: UniProt Q96KJ4 · AlphaFold DB Q96KJ4
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