Research workbench
AlphaFold monomer V2.0 prediction for probable DNA mismatch repair protein MSH6 (Q9VUM0)
Analyse AlphaFold monomer V2.0 prediction for probable DNA mismatch repair protein MSH6… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VUM0
- Type
- protein
- Length
- 1,190 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Probable DNA mismatch repair protein MSH6
- UniProt
- Q9VUM0
- Pockets
- 14 · best druggability 0.82
Structure
1 distinct chain · 40% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable DNA mismatch repair protein MSH6 | protein | 1190 | 40% helix, 14% strand | Q9VUM0 |
Pockets
14 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1011 | 0.82 | 0.83 | 101 | empty |
| 2 | 522 | 0.76 | 0.83 | 40 | empty |
| 3 | 295 | 0.53 | 0.75 | 36 | empty |
| 4 | 197 | 0.52 | 0.77 | 33 | empty |
| 5 | 89 | 0.52 | 0.84 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VUM0
- Elsewhere: UniProt Q9VUM0 · AlphaFold DB Q9VUM0
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