Research workbench
AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH6 (E1BYJ2)
Analyse AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH6 (E1BYJ2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- E1BYJ2
- Type
- protein
- Length
- 1,337 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe46e19D0C021ABB95F0f435140Dfd7217c8e6810
- Molecule
- DNA mismatch repair protein MSH6
- UniProt
- E1BYJ2
- Pockets
- 14 · best druggability 0.74
Structure
1 distinct chain · 37% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA mismatch repair protein MSH6 | protein | 1337 | 37% helix, 15% strand | E1BYJ2 |
Pockets
14 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 403 | 0.74 | 0.84 | 53 | empty |
| 2 | 577 | 0.72 | 0.80 | 57 | empty |
| 3 | 680 | 0.72 | 0.78 | 68 | empty |
| 4 | 306 | 0.56 | 0.76 | 42 | empty |
| 5 | 195 | 0.48 | 0.75 | 36 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E1BYJ2
- Elsewhere: UniProt E1BYJ2 · AlphaFold DB E1BYJ2
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