Research workbench
AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH3 (Q6BW83)
Analyse AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH3 (Q6BW83) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6BW83
- Type
- protein
- Length
- 1,028 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe88775a4bc2FA59219bb338d0EE3AC68a8b5636B
- Molecule
- DNA mismatch repair protein MSH3
- UniProt
- Q6BW83
- Pockets
- 9 · best druggability 0.81
Structure
1 distinct chain · 44% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA mismatch repair protein MSH3 | protein | 1028 | 44% helix, 16% strand | Q6BW83 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1179 | 0.81 | 0.83 | 118 | empty |
| 2 | 1082 | 0.77 | 0.79 | 82 | empty |
| 3 | 353 | 0.67 | 0.81 | 45 | empty |
| 4 | 98 | 0.38 | 0.76 | 15 | empty |
| 5 | 71 | 0.38 | 0.78 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6BW83
- Elsewhere: UniProt Q6BW83 · AlphaFold DB Q6BW83
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