Research workbench
AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH3 (B0YCF6)
Analyse AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH3 (B0YCF6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0YCF6
- Type
- protein
- Length
- 1,123 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- DNA mismatch repair protein MSH3
- UniProt
- B0YCF6
- Pockets
- 12 · best druggability 0.80
Structure
1 distinct chain · 42% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA mismatch repair protein MSH3 | protein | 1123 | 42% helix, 15% strand | B0YCF6 |
Pockets
12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 941 | 0.80 | 0.82 | 83 | empty |
| 2 | 521 | 0.77 | 0.85 | 54 | empty |
| 3 | 433 | 0.57 | 0.74 | 44 | empty |
| 4 | 330 | 0.54 | 0.75 | 37 | empty |
| 5 | 237 | 0.50 | 0.75 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0YCF6
- Elsewhere: UniProt B0YCF6 · AlphaFold DB B0YCF6
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