Research workbench
AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH2 (P54275)
Analyse AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH2 (P54275) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P54275
- Type
- protein
- Length
- 933 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- DNA mismatch repair protein MSH2
- UniProt
- P54275
- Pockets
- 13 · best druggability 0.67
Structure
1 distinct chain · 49% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA mismatch repair protein MSH2 | protein | 933 | 49% helix, 19% strand | P54275 |
Pockets
13 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 555 | 0.67 | 0.77 | 45 | empty |
| 2 | 337 | 0.67 | 0.81 | 37 | empty |
| 3 | 199 | 0.65 | 0.84 | 48 | empty |
| 4 | 461 | 0.58 | 0.74 | 47 | empty |
| 5 | 248 | 0.55 | 0.77 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54275
- Elsewhere: UniProt P54275 · AlphaFold DB P54275
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