Research workbench
AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH2 (Q9XGC9)
Analyse AlphaFold monomer V2.0 prediction for DNA mismatch repair protein MSH2 (Q9XGC9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9XGC9
- Type
- protein
- Length
- 942 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9823334B175F9f2683922fd5F25c4D9e96Fd15E9
- Molecule
- DNA mismatch repair protein MSH2
- UniProt
- Q9XGC9
- Pockets
- 10 · best druggability 0.72
Structure
1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA mismatch repair protein MSH2 | protein | 942 | 48% helix, 18% strand | Q9XGC9 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 955 | 0.72 | 0.76 | 64 | empty |
| 2 | 517 | 0.70 | 0.80 | 41 | empty |
| 3 | 387 | 0.67 | 0.80 | 48 | empty |
| 4 | 213 | 0.61 | 0.82 | 35 | empty |
| 5 | 242 | 0.52 | 0.76 | 34 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9XGC9
- Elsewhere: UniProt Q9XGC9 · AlphaFold DB Q9XGC9
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