Research workbench
AlphaFold monomer V2.0 prediction for cation-dependent mannose-6-phosphate receptor (P20645)
Analyse AlphaFold monomer V2.0 prediction for cation-dependent mannose-6-phosphate… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P20645
- Type
- protein
- Length
- 277 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35cE46a4a30196447966Bd34E1e090Eb6D1bAd3f
- Molecule
- Cation-dependent mannose-6-phosphate receptor
- UniProt
- P20645
- Pockets
- 1 · best druggability 0.27
Structure
1 distinct chain · 34% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cation-dependent mannose-6-phosphate receptor | protein | 277 | 34% helix, 21% strand | P20645 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.27 | 0.75 | 15 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 1JUQ · GGA3 VHS domain complexed with C-terminal peptide from cation-dependent Mannose… · an experimental structure of the same protein · chain A against H, TM-score 0.03
- 1JUQ · GGA3 vhs domain complexed with C-terminal peptide from cation- dependent mannose… · an experimental structure of the same protein · chain A against H, TM-score 0.03
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P20645
- Elsewhere: UniProt P20645 · AlphaFold DB P20645
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