Research workbench
AlphaFold monomer V2.0 prediction for monofunctional pimaradiene synthase (M4HYC8)
Analyse AlphaFold monomer V2.0 prediction for monofunctional pimaradiene synthase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- M4HYC8
- Type
- protein
- Length
- 868 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xFE12884Eff419603b6dFefe423f9b5276dad6aD4
- Molecule
- Monofunctional pimaradiene synthase
- UniProt
- M4HYC8
- Pockets
- 7 · best druggability 0.82
Structure
1 distinct chain · 59% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Monofunctional pimaradiene synthase | protein | 868 | 59% helix, 1% strand | M4HYC8 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 570 | 0.82 | 0.88 | 64 | empty |
| 2 | 388 | 0.79 | 0.88 | 33 | empty |
| 3 | 487 | 0.72 | 0.81 | 63 | empty |
| 4 | 583 | 0.72 | 0.80 | 53 | empty |
| 5 | 53 | 0.70 | 0.98 | 21 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt M4HYC8
- Elsewhere: UniProt M4HYC8 · AlphaFold DB M4HYC8
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