Research workbench
AlphaFold monomer V2.0 prediction for murein peptide amidase a (P0ACV7)
Analyse AlphaFold monomer V2.0 prediction for murein peptide amidase a (P0ACV7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0ACV7
- Type
- protein
- Length
- 242 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB7950E95eAd230FCC2CE18A361294b6999077050
- Molecule
- Murein peptide amidase a
- UniProt
- P0ACV7
- Pockets
- 3 · best druggability 0.64
Structure
1 distinct chain · 31% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Murein peptide amidase a | protein | 242 | 31% helix, 17% strand | P0ACV7 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 311 | 0.64 | 0.80 | 46 | empty |
| 2 | 101 | 0.41 | 0.77 | 18 | empty |
| 3 | 62 | 0.29 | 0.73 | 10 | empty |
Compared structures
- 5HXD · Crystal structure of murein-tripeptide amidase mpaa from escherichia COLI O157 · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 5HXD · Crystal structure of murein-tripeptide amidase MpaA from Escherichia coli O157 · an experimental structure of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0ACV7
- Elsewhere: UniProt P0ACV7 · AlphaFold DB P0ACV7
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