Research workbench
AlphaFold monomer V2.0 prediction for cell wall mannoprotein 1 (O42721)
Analyse AlphaFold monomer V2.0 prediction for cell wall mannoprotein 1 (O42721) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O42721
- Type
- protein
- Length
- 462 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Cell wall mannoprotein 1
- UniProt
- O42721
- Pockets
- 4 · best druggability 0.83
Structure
1 distinct chain · 58% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cell wall mannoprotein 1 | protein | 462 | 58% helix, 0% strand | O42721 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 288 | 0.83 | 0.94 | 50 | empty |
| 2 | 279 | 0.81 | 0.92 | 41 | empty |
| 3 | 681 | 0.68 | 0.76 | 75 | empty |
| 4 | 70 | 0.30 | 0.74 | 12 | empty |
Compared structures
- 3L1N · Crystal structure of MP1P ligand binding domain 2 complexd with palmitic acid · an experimental structure of the same protein · chain A against A, TM-score 0.23
- 3L1N · Crystal structure of Mp1p ligand binding domain 2 complexd with palmitic acid · an experimental structure of the same protein · chain A against A, TM-score 0.23
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O42721
- Elsewhere: UniProt O42721 · AlphaFold DB O42721
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