Research workbench
AlphaFold monomer V2.0 prediction for tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg (B0KRB9)
Analyse AlphaFold monomer V2.0 prediction for tRNA uridine 5-carboxymethylaminomethyl… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0KRB9
- Type
- protein
- Length
- 630 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0cC2AEeb66a4ee22dDdd908c0A663C8De1D2D3e7
- Molecule
- TRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg
- UniProt
- B0KRB9
- Pockets
- 9 · best druggability 0.80
Structure
1 distinct chain · 43% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg | protein | 630 | 43% helix, 19% strand | B0KRB9 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 715 | 0.80 | 0.84 | 91 | empty |
| 2 | 271 | 0.60 | 0.79 | 35 | empty |
| 3 | 230 | 0.55 | 0.78 | 29 | empty |
| 4 | 161 | 0.43 | 0.74 | 25 | empty |
| 5 | 112 | 0.42 | 0.77 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0KRB9
- Elsewhere: UniProt B0KRB9 · AlphaFold DB B0KRB9
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