Research workbench
AlphaFold monomer V2.0 prediction for tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc (Q3SID4)
Analyse AlphaFold monomer V2.0 prediction for tRNA 5-methylaminomethyl-2-thiouridine… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3SID4
- Type
- protein
- Length
- 616 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- TRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc
- UniProt
- Q3SID4
- Pockets
- 6 · best druggability 0.79
Structure
1 distinct chain · 34% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc | protein | 616 | 34% helix, 25% strand | Q3SID4 |
Pockets
6 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 796 | 0.79 | 0.82 | 87 | empty |
| 2 | 293 | 0.71 | 0.85 | 57 | empty |
| 3 | 192 | 0.64 | 0.84 | 26 | empty |
| 4 | 401 | 0.58 | 0.75 | 61 | empty |
| 5 | 158 | 0.51 | 0.79 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3SID4
- Elsewhere: UniProt Q3SID4 · AlphaFold DB Q3SID4
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