Research workbench
AlphaFold monomer V2.0 prediction for tRNA-specific 2-thiouridylase mnma (C5C2D6)
Analyse AlphaFold monomer V2.0 prediction for tRNA-specific 2-thiouridylase mnma… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5C2D6
- Type
- protein
- Length
- 380 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- TRNA-specific 2-thiouridylase mnma
- UniProt
- C5C2D6
- Pockets
- 4 · best druggability 0.77
Structure
1 distinct chain · 30% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-specific 2-thiouridylase mnma | protein | 380 | 30% helix, 29% strand | C5C2D6 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 685 | 0.77 | 0.82 | 76 | empty |
| 2 | 135 | 0.41 | 0.75 | 21 | empty |
| 3 | 81 | 0.37 | 0.76 | 17 | empty |
| 4 | 81 | 0.30 | 0.72 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5C2D6
- Elsewhere: UniProt C5C2D6 · AlphaFold DB C5C2D6
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