Research workbench
AlphaFold monomer V2.0 prediction for tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (A1V713)
Analyse AlphaFold monomer V2.0 prediction for tRNA-2-methylthio-N(6)-dimethylallyladenos… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1V713
- Type
- protein
- Length
- 457 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4a9eD2eAf8d72EFA9810BAb10Ec13711141c1541
- Molecule
- TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
- UniProt
- A1V713
- Pockets
- 4 · best druggability 0.80
Structure
1 distinct chain · 40% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | protein | 457 | 40% helix, 22% strand | A1V713 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 476 | 0.80 | 0.87 | 43 | empty |
| 2 | 443 | 0.62 | 0.76 | 53 | empty |
| 3 | 142 | 0.44 | 0.77 | 27 | empty |
| 4 | 63 | 0.31 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1V713
- Elsewhere: UniProt A1V713 · AlphaFold DB A1V713
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