Research workbench
AlphaFold monomer V2.0 prediction for tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (Q5E6U2)
Analyse AlphaFold monomer V2.0 prediction for tRNA-2-methylthio-N(6)-dimethylallyladenos… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5E6U2
- Type
- protein
- Length
- 474 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
- Molecule
- TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
- UniProt
- Q5E6U2
- Pockets
- 4 · best druggability 0.80
Structure
1 distinct chain · 39% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-2-methylthio-N(6)-dimethylallyladenosine synthase | protein | 474 | 39% helix, 23% strand | Q5E6U2 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 984 | 0.80 | 0.81 | 99 | empty |
| 2 | 348 | 0.59 | 0.77 | 36 | empty |
| 3 | 64 | 0.37 | 0.79 | 14 | empty |
| 4 | 76 | 0.33 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5E6U2
- Elsewhere: UniProt Q5E6U2 · AlphaFold DB Q5E6U2
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