Research workbench
AlphaFold monomer V2.0 prediction for malate dehydrogenase (B6IYP5)
Analyse AlphaFold monomer V2.0 prediction for malate dehydrogenase (B6IYP5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B6IYP5
- Type
- protein
- Length
- 319 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x808E7f2446Bf50908aD112C70afD6E2e27bFd57D
- Molecule
- Malate dehydrogenase
- UniProt
- B6IYP5
- Pockets
- 4 · best druggability 0.70
Structure
1 distinct chain · 51% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Malate dehydrogenase | protein | 319 | 51% helix, 20% strand | B6IYP5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 553 | 0.70 | 0.79 | 58 | empty |
| 2 | 117 | 0.40 | 0.75 | 20 | empty |
| 3 | 56 | 0.33 | 0.77 | 14 | empty |
| 4 | 91 | 0.33 | 0.73 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B6IYP5
- Elsewhere: UniProt B6IYP5 · AlphaFold DB B6IYP5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.