Research workbench
AlphaFold monomer V2.0 prediction for malate dehydrogenase, mitochondrial (P17505)
Analyse AlphaFold monomer V2.0 prediction for malate dehydrogenase, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P17505
- Type
- protein
- Length
- 334 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Malate dehydrogenase, mitochondrial
- UniProt
- P17505
- Pockets
- 2 · best druggability 0.76
Structure
1 distinct chain · 46% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Malate dehydrogenase, mitochondrial | protein | 334 | 46% helix, 17% strand | P17505 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 477 | 0.76 | 0.84 | 56 | empty |
| 2 | 76 | 0.38 | 0.78 | 16 | empty |
Compared structures
- 1HR9 · Yeast Mitochondrial Processing Peptidase beta-E73Q Mutant Complexed with Malate… · an experimental structure of the same protein · chain A against O, TM-score 0.02
- 1HR9 · Yeast mitochondrial processing peptidase beta-E73Q mutant complexed with malate… · an experimental structure of the same protein · chain A against O, TM-score 0.02
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P17505
- Elsewhere: UniProt P17505 · AlphaFold DB P17505
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.