Research workbench
AlphaFold monomer V2.0 prediction for uptake hydrogenase large subunit (O33406)
Analyse AlphaFold monomer V2.0 prediction for uptake hydrogenase large subunit (O33406) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O33406
- Type
- protein
- Length
- 604 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x10Ca0D170A4d6Ed403dE210bA450Baa44a3258bF
- Molecule
- Uptake hydrogenase large subunit
- UniProt
- O33406
- Pockets
- 7 · best druggability 0.72
Structure
1 distinct chain · 42% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uptake hydrogenase large subunit | protein | 604 | 42% helix, 16% strand | O33406 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 55 | 0.72 | 0.98 | 22 | empty |
| 2 | 264 | 0.69 | 0.85 | 24 | empty |
| 3 | 71 | 0.44 | 0.81 | 16 | empty |
| 4 | 75 | 0.41 | 0.79 | 19 | empty |
| 5 | 146 | 0.41 | 0.74 | 23 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O33406
- Elsewhere: UniProt O33406 · AlphaFold DB O33406
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