Research workbench
AlphaFold monomer V2.0 prediction for autoinducer 2 import system permease protein lsrc (Q83RD8)
Analyse AlphaFold monomer V2.0 prediction for autoinducer 2 import system permease… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q83RD8
- Type
- protein
- Length
- 342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa8003B255b9AFb24F952260d92Ca9AeCD5E715B2
- Molecule
- Autoinducer 2 import system permease protein lsrc
- UniProt
- Q83RD8
- Pockets
- 4 · best druggability 0.48
Structure
1 distinct chain · 73% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Autoinducer 2 import system permease protein lsrc | protein | 342 | 73% helix, 2% strand | Q83RD8 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 187 | 0.48 | 0.75 | 33 | empty |
| 2 | 162 | 0.47 | 0.76 | 19 | empty |
| 3 | 51 | 0.32 | 0.76 | 12 | empty |
| 4 | 55 | 0.31 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q83RD8
- Elsewhere: UniProt Q83RD8 · AlphaFold DB Q83RD8
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