Research workbench
AlphaFold monomer V2.0 prediction for lipoxygenase homology domain- containing protein 1 (Q8IVV2)
Analyse AlphaFold monomer V2.0 prediction for lipoxygenase homology domain- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8IVV2
- Type
- protein
- Length
- 2,067 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa02d851D8aB39CC5520A796fAA338fbc4fE2cd63
- Molecule
- Lipoxygenase homology domain-containing protein 1
- UniProt
- Q8IVV2
- Pockets
- 20 · best druggability 0.82
Structure
1 distinct chain · 5% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lipoxygenase homology domain-containing protein 1 | protein | 2067 | 5% helix, 48% strand | Q8IVV2 |
Pockets
20 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 827 | 0.82 | 0.85 | 92 | empty |
| 2 | 1104 | 0.81 | 0.82 | 105 | empty |
| 3 | 1074 | 0.79 | 0.81 | 85 | empty |
| 4 | 791 | 0.75 | 0.80 | 59 | empty |
| 5 | 775 | 0.71 | 0.77 | 62 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8IVV2
- Elsewhere: UniProt Q8IVV2 · AlphaFold DB Q8IVV2
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