Research workbench
AlphaFold monomer V2.0 prediction for lysosomal cobalamin transport escort protein LMBD1 (Q9NUN5)
Analyse AlphaFold monomer V2.0 prediction for lysosomal cobalamin transport escort… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9NUN5
- Type
- protein
- Length
- 540 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Lysosomal cobalamin transport escort protein LMBD1
- UniProt
- Q9NUN5
- Pockets
- 5 · best druggability 0.68
Structure
1 distinct chain · 70% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysosomal cobalamin transport escort protein LMBD1 | protein | 540 | 70% helix, 5% strand | Q9NUN5 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 721 | 0.68 | 0.75 | 48 | empty |
| 2 | 183 | 0.64 | 0.84 | 27 | empty |
| 3 | 235 | 0.53 | 0.76 | 29 | empty |
| 4 | 146 | 0.42 | 0.75 | 19 | empty |
| 5 | 63 | 0.33 | 0.76 | 14 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NUN5
- Elsewhere: UniProt Q9NUN5 · AlphaFold DB Q9NUN5
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