Research workbench
AlphaFold monomer V2.0 prediction for L-lactate dehydrogenase B chain (P42119)
Analyse AlphaFold monomer V2.0 prediction for L-lactate dehydrogenase B chain (P42119) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P42119
- Type
- protein
- Length
- 334 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- L-lactate dehydrogenase B chain
- UniProt
- P42119
- Pockets
- 3 · best druggability 0.67
Structure
1 distinct chain · 45% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | L-lactate dehydrogenase B chain | protein | 334 | 45% helix, 17% strand | P42119 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 504 | 0.67 | 0.78 | 48 | empty |
| 2 | 124 | 0.40 | 0.75 | 21 | empty |
| 3 | 51 | 0.30 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P42119
- Elsewhere: UniProt P42119 · AlphaFold DB P42119
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