Research workbench
AlphaFold monomer V2.0 prediction for DNA damage checkpoint protein LCD1 (Q6FNX0)
Analyse AlphaFold monomer V2.0 prediction for DNA damage checkpoint protein LCD1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6FNX0
- Type
- protein
- Length
- 667 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1Fbc4334c6ACf0E9Cee9C8366EAB84F4575214B6
- Molecule
- DNA damage checkpoint protein LCD1
- UniProt
- Q6FNX0
- Pockets
- 3 · best druggability 0.64
Structure
1 distinct chain · 62% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA damage checkpoint protein LCD1 | protein | 667 | 62% helix, 3% strand | Q6FNX0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 343 | 0.64 | 0.79 | 46 | empty |
| 2 | 59 | 0.47 | 0.84 | 20 | empty |
| 3 | 103 | 0.42 | 0.77 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6FNX0
- Elsewhere: UniProt Q6FNX0 · AlphaFold DB Q6FNX0
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