Research workbench
AlphaFold monomer V2.0 prediction for integrin beta-8 (Q0VBD0)
Analyse AlphaFold monomer V2.0 prediction for integrin beta-8 (Q0VBD0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0VBD0
- Type
- protein
- Length
- 767 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Integrin beta-8
- UniProt
- Q0VBD0
- Pockets
- 6 · best druggability 0.48
Structure
1 distinct chain · 27% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Integrin beta-8 | protein | 767 | 27% helix, 21% strand | Q0VBD0 |
Pockets
6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 103 | 0.48 | 0.81 | 27 | empty |
| 2 | 86 | 0.36 | 0.75 | 15 | empty |
| 3 | 100 | 0.33 | 0.73 | 19 | empty |
| 4 | 68 | 0.29 | 0.73 | 12 | empty |
| 5 | 75 | 0.28 | 0.72 | 15 | empty |
Modifications
Observed in the structure: 24 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0VBD0
- Elsewhere: UniProt Q0VBD0 · AlphaFold DB Q0VBD0
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