Research workbench
AlphaFold monomer V2.0 prediction for 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) (B0B9G5)
Analyse AlphaFold monomer V2.0 prediction for 4-hydroxy-3-methylbut-2-en-1-yl… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0B9G5
- Type
- protein
- Length
- 602 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)
- UniProt
- B0B9G5
- Pockets
- 7 · best druggability 0.75
Structure
1 distinct chain · 44% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | protein | 602 | 44% helix, 18% strand | B0B9G5 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.75 | 0.98 | 25 | empty |
| 2 | 242 | 0.61 | 0.81 | 29 | empty |
| 3 | 229 | 0.53 | 0.77 | 26 | empty |
| 4 | 137 | 0.45 | 0.77 | 19 | empty |
| 5 | 73 | 0.37 | 0.77 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0B9G5
- Elsewhere: UniProt B0B9G5 · AlphaFold DB B0B9G5
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