Research workbench
AlphaFold monomer V2.0 prediction for 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) (B0VKR8)
Analyse AlphaFold monomer V2.0 prediction for 4-hydroxy-3-methylbut-2-en-1-yl… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0VKR8
- Type
- protein
- Length
- 371 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)
- UniProt
- B0VKR8
- Pockets
- 2 · best druggability 0.56
Structure
1 distinct chain · 45% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | protein | 371 | 45% helix, 20% strand | B0VKR8 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 169 | 0.56 | 0.81 | 22 | empty |
| 2 | 108 | 0.40 | 0.76 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0VKR8
- Elsewhere: UniProt B0VKR8 · AlphaFold DB B0VKR8
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