Research workbench
AlphaFold monomer V2.0 prediction for 4-diphosphocytidyl-2-C-methyl- D-erythritol kinase (Q83IA0)
Analyse AlphaFold monomer V2.0 prediction for 4-diphosphocytidyl-2-C-methyl… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q83IA0
- Type
- protein
- Length
- 409 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
- UniProt
- Q83IA0
- Pockets
- 4 · best druggability 0.78
Structure
1 distinct chain · 30% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | protein | 409 | 30% helix, 11% strand | Q83IA0 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 902 | 0.78 | 0.80 | 72 | empty |
| 2 | 178 | 0.47 | 0.75 | 29 | empty |
| 3 | 193 | 0.45 | 0.74 | 23 | empty |
| 4 | 104 | 0.34 | 0.73 | 24 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q83IA0
- Elsewhere: UniProt Q83IA0 · AlphaFold DB Q83IA0
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