Research workbench
AlphaFold monomer V2.0 prediction for isopentenyl-diphosphate delta- isomerase (P61615)
Analyse AlphaFold monomer V2.0 prediction for isopentenyl-diphosphate delta- isomerase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P61615
- Type
- protein
- Length
- 368 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Isopentenyl-diphosphate delta-isomerase
- UniProt
- P61615
- Pockets
- 2 · best druggability 0.82
Structure
1 distinct chain · 51% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Isopentenyl-diphosphate delta-isomerase | protein | 368 | 51% helix, 14% strand | P61615 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 214 | 0.82 | 0.96 | 43 | empty |
| 2 | 150 | 0.46 | 0.76 | 20 | empty |
Compared structures
- 2ZRZ · Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2ZRZ · Crystal structure of sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3B05 · Crystal structure of sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3B05 · Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2ZRY · Crystal structure of sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2ZRY · Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3B06 · Crystal structure of sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3B06 · Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2ZRW · Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2ZRW · Crystal structure of sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2ZRX · Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2ZRX · Crystal structure of sulfolobus shibatae isopentenyl diphosphate isomerase in complex… · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61615
- Elsewhere: UniProt P61615 · AlphaFold DB P61615
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