Research workbench
AlphaFold monomer V2.0 prediction for isopentenyl-diphosphate delta- isomerase (Q9ZD90)
Analyse AlphaFold monomer V2.0 prediction for isopentenyl-diphosphate delta- isomerase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9ZD90
- Type
- protein
- Length
- 342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1054D383f4695fc7A5ecBD5BcA9BBC5F2f88B6c0
- Molecule
- Isopentenyl-diphosphate delta-isomerase
- UniProt
- Q9ZD90
- Pockets
- 4 · best druggability 0.80
Structure
1 distinct chain · 48% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Isopentenyl-diphosphate delta-isomerase | protein | 342 | 48% helix, 15% strand | Q9ZD90 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 330 | 0.80 | 0.91 | 52 | empty |
| 2 | 133 | 0.42 | 0.75 | 18 | empty |
| 3 | 92 | 0.37 | 0.75 | 18 | empty |
| 4 | 70 | 0.30 | 0.74 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ZD90
- Elsewhere: UniProt Q9ZD90 · AlphaFold DB Q9ZD90
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