Research workbench
AlphaFold monomer V2.0 prediction for isopentenyl-diphosphate delta- isomerase (B3EFC7)
Analyse AlphaFold monomer V2.0 prediction for isopentenyl-diphosphate delta- isomerase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B3EFC7
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Isopentenyl-diphosphate delta-isomerase
- UniProt
- B3EFC7
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 49% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Isopentenyl-diphosphate delta-isomerase | protein | 360 | 49% helix, 14% strand | B3EFC7 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 319 | 0.79 | 0.90 | 46 | empty |
| 2 | 131 | 0.42 | 0.75 | 21 | empty |
| 3 | 56 | 0.34 | 0.78 | 19 | empty |
| 4 | 83 | 0.33 | 0.74 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B3EFC7
- Elsewhere: UniProt B3EFC7 · AlphaFold DB B3EFC7
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