Research workbench
AlphaFold monomer V2.0 prediction for ribosome hibernation promotion factor (Q2G055)
Analyse AlphaFold monomer V2.0 prediction for ribosome hibernation promotion factor… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2G055
- Type
- protein
- Length
- 190 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Ribosome hibernation promotion factor
- UniProt
- Q2G055
- Pockets
- 2 · best druggability 0.39
Structure
1 distinct chain · 32% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome hibernation promotion factor | protein | 190 | 32% helix, 26% strand | Q2G055 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 86 | 0.39 | 0.77 | 15 | empty |
| 2 | 65 | 0.32 | 0.75 | 12 | empty |
Compared structures
- 5ND9 · Hibernating ribosome from Staphylococcus aureus (Rotated state) · an experimental structure of the same protein · chain A against v, TM-score 0.46
- 5ND8 · Hibernating ribosome from Staphylococcus aureus (Unrotated state) · an experimental structure of the same protein · chain A against v, TM-score 0.46
- 5NKO · Solution structure of the C-terminal domain of S. aureus Hibernating Promoting Factor… · an experimental structure of the same protein · chain A against B, TM-score 0.29
- 5NKO · Solution structure of the C-terminal domain of S. aureus hibernating promoting factor… · an experimental structure of the same protein · chain A against A, TM-score 0.29
- 6T7O · X-ray structure of the C-terminal domain of S. aureus hibernating promoting factor… · an experimental structure of the same protein · chain A against A, TM-score 0.28
- 6T7O · X-ray structure of the C-terminal domain of S. aureus Hibernating Promoting Factor… · an experimental structure of the same protein · chain A against A, TM-score 0.28
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2G055
- Elsewhere: UniProt Q2G055 · AlphaFold DB Q2G055
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