Research workbench
AlphaFold monomer V2.0 prediction for effector protein HOPM1 (Q4ZX82)
Analyse AlphaFold monomer V2.0 prediction for effector protein HOPM1 (Q4ZX82) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4ZX82
- Type
- protein
- Length
- 718 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xCe798D8eC2d4C6C1A5c2B7B7212A387006233F43
- Molecule
- Effector protein HOPM1
- UniProt
- Q4ZX82
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 67% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Effector protein HOPM1 | protein | 718 | 67% helix, 3% strand | Q4ZX82 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 468 | 0.74 | 0.83 | 36 | empty |
| 2 | 827 | 0.71 | 0.77 | 74 | empty |
| 3 | 338 | 0.64 | 0.79 | 34 | empty |
| 4 | 207 | 0.47 | 0.74 | 26 | empty |
| 5 | 147 | 0.44 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4ZX82
- Elsewhere: UniProt Q4ZX82 · AlphaFold DB Q4ZX82
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