Research workbench
AlphaFold monomer V2.0 prediction for effector protein HOPAE1 (Q7PC62)
Analyse AlphaFold monomer V2.0 prediction for effector protein HOPAE1 (Q7PC62) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7PC62
- Type
- protein
- Length
- 914 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6164D6eD35868169D8366C56A5C3F4D4aFBfCC1C
- Molecule
- Effector protein HOPAE1
- UniProt
- Q7PC62
- Pockets
- 8 · best druggability 0.78
Structure
1 distinct chain · 72% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Effector protein HOPAE1 | protein | 914 | 72% helix, 0% strand | Q7PC62 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1135 | 0.78 | 0.80 | 80 | empty |
| 2 | 1171 | 0.77 | 0.78 | 85 | empty |
| 3 | 869 | 0.75 | 0.78 | 63 | empty |
| 4 | 158 | 0.48 | 0.77 | 29 | empty |
| 5 | 67 | 0.46 | 0.83 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7PC62
- Elsewhere: UniProt Q7PC62 · AlphaFold DB Q7PC62
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