Research workbench
AlphaFold monomer V2.0 prediction for chitooligosaccharidolytic beta- N-acetylglucosaminidase (Q06GJ0)
Analyse AlphaFold monomer V2.0 prediction for chitooligosaccharidolytic beta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q06GJ0
- Type
- protein
- Length
- 594 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x31C2b8Dda9af930b8C9df8eCc4E387b89CF5fc9A
- Molecule
- Chitooligosaccharidolytic beta-N-acetylglucosaminidase
- UniProt
- Q06GJ0
- Pockets
- 3 · best druggability 0.61
Structure
1 distinct chain · 33% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Chitooligosaccharidolytic beta-N-acetylglucosaminidase | protein | 594 | 33% helix, 20% strand | Q06GJ0 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 145 | 0.61 | 0.84 | 22 | empty |
| 2 | 105 | 0.55 | 0.84 | 15 | empty |
| 3 | 112 | 0.44 | 0.78 | 17 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Compared structures
- 3S6T · Crystal structure of insect beta-N-acetyl-D-hexosaminidase OFHEX1 V327G complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 3S6T · Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 V327G complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 3WMC · Crystal structure of insect beta-N-acetyl-D-hexosaminidase OFHEX1 complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3WMC · Crystal structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3OZP · Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with PUGNAc · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3OZP · Crystal structure of insect beta-N-acetyl-D-hexosaminidase OFHEX1 complexed with pugnac · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3OZO · Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with NGT · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3OZO · Crystal structure of insect beta-N-acetyl-D-hexosaminidase OFHEX1 complexed with ngt · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3NSN · Crystal structure of insect beta-N-acetyl-D-hexosaminidase OFHEX1 complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3NSN · Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3VTR · Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 E328A complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 3VTR · Crystal structure of insect beta-N-acetyl-D-hexosaminidase OFHEX1 E328A complexed with… · an experimental structure of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06GJ0
- Elsewhere: UniProt Q06GJ0 · AlphaFold DB Q06GJ0
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