Research workbench
AlphaFold monomer V2.0 prediction for histone deacetylase 4 (P83038)
Analyse AlphaFold monomer V2.0 prediction for histone deacetylase 4 (P83038) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P83038
- Type
- protein
- Length
- 1,080 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Histone deacetylase 4
- UniProt
- P83038
- Pockets
- 5 · best druggability 0.59
Structure
1 distinct chain · 36% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histone deacetylase 4 | protein | 1080 | 36% helix, 5% strand | P83038 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 305 | 0.59 | 0.77 | 35 | empty |
| 2 | 359 | 0.57 | 0.75 | 50 | empty |
| 3 | 141 | 0.47 | 0.77 | 19 | empty |
| 4 | 85 | 0.33 | 0.74 | 14 | empty |
| 5 | 54 | 0.29 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P83038
- Elsewhere: UniProt P83038 · AlphaFold DB P83038
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