Research workbench
AlphaFold monomer V2.0 prediction for histone deacetylase 2 (P56519)
Analyse AlphaFold monomer V2.0 prediction for histone deacetylase 2 (P56519) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P56519
- Type
- protein
- Length
- 488 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Histone deacetylase 2
- UniProt
- P56519
- Pockets
- 7 · best druggability 0.61
Structure
1 distinct chain · 34% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histone deacetylase 2 | protein | 488 | 34% helix, 9% strand | P56519 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 265 | 0.61 | 0.80 | 27 | empty |
| 2 | 59 | 0.53 | 0.87 | 27 | empty |
| 3 | 236 | 0.50 | 0.75 | 27 | empty |
| 4 | 131 | 0.49 | 0.79 | 24 | empty |
| 5 | 51 | 0.34 | 0.78 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56519
- Elsewhere: UniProt P56519 · AlphaFold DB P56519
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.