Research workbench
AlphaFold monomer V2.0 prediction for alpha-amylase B (Q9BN01)
Analyse AlphaFold monomer V2.0 prediction for alpha-amylase B (Q9BN01) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9BN01
- Type
- protein
- Length
- 494 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- Alpha-amylase B
- UniProt
- Q9BN01
- Pockets
- 2 · best druggability 0.58
Structure
1 distinct chain · 32% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alpha-amylase B | protein | 494 | 32% helix, 23% strand | Q9BN01 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 246 | 0.58 | 0.79 | 24 | empty |
| 2 | 141 | 0.40 | 0.74 | 21 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BN01
- Elsewhere: UniProt Q9BN01 · AlphaFold DB Q9BN01
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