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AlphaFold monomer V2.0 prediction for granzyme H (P20718)

Analyse AlphaFold monomer V2.0 prediction for granzyme H (P20718) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
P20718
Type
protein
Length
246 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x431CFe1eAbd5D5954346E0071B3917b9D0600749
Molecule
Granzyme H
UniProt
P20718
Pockets
1 · best druggability 0.46

Structure

1 distinct chain · 10% helix, 35% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGranzyme Hprotein24610% helix, 35% strandP20718

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11570.460.7630empty

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

  • 3TK9 · Crystal structure of human granzyme H · an experimental structure of the same protein · chain A against A, TM-score 0.91
  • 3TK9 · Crystal structure of human granzyme H · an experimental structure of the same protein · chain A against A, TM-score 0.91
  • 3TJV · Crystal structure of human granzyme H with a peptidyl substrate · an experimental structure of the same protein · chain A against A, TM-score 0.91
  • 3TJV · Crystal structure of human granzyme H with a peptidyl substrate · an experimental structure of the same protein · chain A against A, TM-score 0.91
  • 3TJU · Crystal structure of human granzyme H with an inhibitor · an experimental structure of the same protein · chain A against A, TM-score 0.91
  • 3TJU · Crystal structure of human granzyme H with an inhibitor · an experimental structure of the same protein · chain A against A, TM-score 0.91
  • 4GAW · Crystal structure of active human granzyme H · an experimental structure of the same protein · chain A against B, TM-score 0.91
  • 4GAW · Crystal structure of active human granzyme H · an experimental structure of the same protein · chain A against B, TM-score 0.91

Analyse

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