Research workbench
AlphaFold monomer V2.0 prediction for germination protease (Q8RB77)
Analyse AlphaFold monomer V2.0 prediction for germination protease (Q8RB77) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8RB77
- Type
- protein
- Length
- 324 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- Germination protease
- UniProt
- Q8RB77
- Pockets
- 4 · best druggability 0.66
Structure
1 distinct chain · 44% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Germination protease | protein | 324 | 44% helix, 20% strand | Q8RB77 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 518 | 0.66 | 0.78 | 56 | empty |
| 2 | 177 | 0.55 | 0.80 | 31 | empty |
| 3 | 55 | 0.38 | 0.80 | 11 | empty |
| 4 | 90 | 0.36 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8RB77
- Elsewhere: UniProt Q8RB77 · AlphaFold DB Q8RB77
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