Research workbench
AlphaFold monomer V2.0 prediction for germination protease (Q9KD78)
Analyse AlphaFold monomer V2.0 prediction for germination protease (Q9KD78) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9KD78
- Type
- protein
- Length
- 372 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Germination protease
- UniProt
- Q9KD78
- Pockets
- 5 · best druggability 0.70
Structure
1 distinct chain · 49% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Germination protease | protein | 372 | 49% helix, 17% strand | Q9KD78 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 642 | 0.70 | 0.78 | 68 | empty |
| 2 | 193 | 0.60 | 0.82 | 29 | empty |
| 3 | 80 | 0.46 | 0.81 | 24 | empty |
| 4 | 102 | 0.33 | 0.73 | 19 | empty |
| 5 | 73 | 0.30 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KD78
- Elsewhere: UniProt Q9KD78 · AlphaFold DB Q9KD78
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.