Research workbench
AlphaFold monomer V2.0 prediction for probable xaa-pro aminopeptidase BDCG_04966 (C5GKT2)
Analyse AlphaFold monomer V2.0 prediction for probable xaa-pro aminopeptidase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5GKT2
- Type
- protein
- Length
- 506 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Probable xaa-pro aminopeptidase BDCG_04966
- UniProt
- C5GKT2
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 38% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable xaa-pro aminopeptidase BDCG_04966 | protein | 506 | 38% helix, 15% strand | C5GKT2 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 542 | 0.67 | 0.78 | 50 | empty |
| 2 | 63 | 0.41 | 0.81 | 13 | empty |
| 3 | 97 | 0.38 | 0.75 | 18 | empty |
| 4 | 76 | 0.33 | 0.74 | 13 | empty |
| 5 | 54 | 0.32 | 0.77 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5GKT2
- Elsewhere: UniProt C5GKT2 · AlphaFold DB C5GKT2
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