Research workbench
AlphaFold monomer V2.0 prediction for polygalacturonase non-catalytic subunit AROGP3 (P93218)
Analyse AlphaFold monomer V2.0 prediction for polygalacturonase non-catalytic subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P93218
- Type
- protein
- Length
- 632 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xed981C7Bde83976797b0E4fB64b4974D133Bd529
- Molecule
- Polygalacturonase non-catalytic subunit AROGP3
- UniProt
- P93218
- Pockets
- 7 · best druggability 0.82
Structure
1 distinct chain · 18% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polygalacturonase non-catalytic subunit AROGP3 | protein | 632 | 18% helix, 30% strand | P93218 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1091 | 0.82 | 0.83 | 67 | empty |
| 2 | 336 | 0.59 | 0.77 | 35 | empty |
| 3 | 80 | 0.44 | 0.81 | 15 | empty |
| 4 | 98 | 0.42 | 0.78 | 22 | empty |
| 5 | 85 | 0.35 | 0.75 | 18 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P93218
- Elsewhere: UniProt P93218 · AlphaFold DB P93218
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