Research workbench
AlphaFold monomer V2.0 prediction for golgi reassembly-stacking protein 1 (Q9BQQ3)
Analyse AlphaFold monomer V2.0 prediction for golgi reassembly-stacking protein 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9BQQ3
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Golgi reassembly-stacking protein 1
- UniProt
- Q9BQQ3
- Pockets
- 3 · best druggability 0.61
Structure
1 distinct chain · 7% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Golgi reassembly-stacking protein 1 | protein | 440 | 7% helix, 15% strand | Q9BQQ3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 261 | 0.61 | 0.80 | 39 | empty |
| 2 | 61 | 0.45 | 0.83 | 20 | empty |
| 3 | 109 | 0.44 | 0.78 | 18 | empty |
Compared structures
- 4REY · Crystal Structure of the GRASP65-GM130 C-terminal peptide complex · an experimental structure of the same protein · chain A against A, TM-score 0.39
- 4REY · Crystal structure of the GRASP65-GM130 C-terminal peptide complex · an experimental structure of the same protein · chain A against A, TM-score 0.39
- 6G8T · Crystal structures of the single PDZ domains from GRASP65 and their interaction with the… · an experimental structure of the same protein · chain A against A, TM-score 0.23
- 6G8T · Crystal Structures of the Single PDZ Domains from GRASP65 and their Interaction with the… · an experimental structure of the same protein · chain A against A, TM-score 0.23
- 6G8W · Crystal structures of the single PDZ domains from GRASP65 and their interaction with the… · an experimental structure of the same protein · chain A against A, TM-score 0.19
- 6G8W · Crystal Structures of the Single PDZ Domains from GRASP65 and their Interaction with the… · an experimental structure of the same protein · chain A against A, TM-score 0.19
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BQQ3
- Elsewhere: UniProt Q9BQQ3 · AlphaFold DB Q9BQQ3
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