Research workbench
AlphaFold monomer V2.0 prediction for N-acetylglucosamine-1-phosphotransferase subunits ALPHA/BETA (Q3T906)
Analyse AlphaFold monomer V2.0 prediction for N-acetylglucosamine-1-phosphotransferase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3T906
- Type
- protein
- Length
- 1,256 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- N-acetylglucosamine-1-phosphotransferase subunits ALPHA/BETA
- UniProt
- Q3T906
- Pockets
- 10 · best druggability 0.83
Structure
1 distinct chain · 33% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | N-acetylglucosamine-1-phosphotransferase subunits ALPHA/BETA | protein | 1256 | 33% helix, 15% strand | Q3T906 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 865 | 0.83 | 0.85 | 86 | empty |
| 2 | 297 | 0.68 | 0.83 | 37 | empty |
| 3 | 193 | 0.51 | 0.77 | 18 | empty |
| 4 | 170 | 0.50 | 0.77 | 25 | empty |
| 5 | 121 | 0.41 | 0.75 | 24 | empty |
Modifications
Observed in the structure: 8 disulfide (disulfide).
Compared structures
- 7S06 · Cryo-EM structure of human GlcNAc-1-phosphotransferase A2B2 subcomplex · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 7S06 · Cryo-EM structure of human glcnac-1-phosphotransferase A2B2 subcomplex · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 7S05 · Cryo-EM structure of human GlcNAc-1-phosphotransferase A2B2 subcomplex · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 7S05 · Cryo-EM structure of human glcnac-1-phosphotransferase A2B2 subcomplex · an experimental structure of the same protein · chain A against A, TM-score 0.32
- 2N6D · NMR structure of the 140-315 fragment of the N-acetylglucosamine-1- phosphate… · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 2N6D · NMR structure of the 140-315 fragment of the N-acetylglucosamine-1-phosphate transferase… · an experimental structure of the same protein · chain A against A, TM-score 0.11
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3T906
- Elsewhere: UniProt Q3T906 · AlphaFold DB Q3T906
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