Research workbench
AlphaFold monomer V2.0 prediction for GDP-mannose transporter (Q5A477)
Analyse AlphaFold monomer V2.0 prediction for GDP-mannose transporter (Q5A477) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5A477
- Type
- protein
- Length
- 371 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- GDP-mannose transporter
- UniProt
- Q5A477
- Pockets
- 3 · best druggability 0.80
Structure
1 distinct chain · 80% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | GDP-mannose transporter | protein | 371 | 80% helix, 0% strand | Q5A477 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 982 | 0.80 | 0.82 | 66 | empty |
| 2 | 524 | 0.67 | 0.77 | 42 | empty |
| 3 | 236 | 0.55 | 0.77 | 36 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5A477
- Elsewhere: UniProt Q5A477 · AlphaFold DB Q5A477
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