Research workbench

AlphaFold monomer V2.0 prediction for gem-interacting protein (Q9P107)

Analyse AlphaFold monomer V2.0 prediction for gem-interacting protein (Q9P107) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9P107
Type: protein
Length: 970 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x7782F4817b37743d738e9aF842bf74bd50f2015E
Molecule: Gem-interacting protein
UniProt: Q9P107
Pockets: 7 · best druggability 0.69

Structure

1 distinct chain · 41% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Gem-interacting protein	protein	970	41% helix, 1% strand	Q9P107

Pockets

7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	855	0.69	0.75	58	empty
2	192	0.48	0.76	25	empty
3	244	0.47	0.73	24	empty
4	154	0.43	0.75	32	empty
5	53	0.33	0.77	11	empty

Compared structures

3QWE · Crystal structure of the N-terminal domain of the GEM interacting protein · an experimental structure of the same protein · chain A against A, TM-score 0.27
3QWE · Crystal structure of the N-terminal domain of the gem interacting protein · an experimental structure of the same protein · chain A against A, TM-score 0.27

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9P107
Elsewhere: UniProt Q9P107 · AlphaFold DB Q9P107

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