Research workbench
AlphaFold monomer V2.0 prediction for SODIUM/GLUTAMATE symporter (P0AER8)
Analyse AlphaFold monomer V2.0 prediction for SODIUM/GLUTAMATE symporter (P0AER8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0AER8
- Type
- protein
- Length
- 401 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x98bD5c75927e9e85314A9C46b5b994202274a8a5
- Molecule
- SODIUM/GLUTAMATE symporter
- UniProt
- P0AER8
- Pockets
- 6 · best druggability 0.68
Structure
1 distinct chain · 77% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SODIUM/GLUTAMATE symporter | protein | 401 | 77% helix, 1% strand | P0AER8 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 451 | 0.68 | 0.79 | 50 | empty |
| 2 | 213 | 0.57 | 0.79 | 34 | empty |
| 3 | 183 | 0.48 | 0.76 | 27 | empty |
| 4 | 127 | 0.41 | 0.74 | 20 | empty |
| 5 | 59 | 0.37 | 0.79 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AER8
- Elsewhere: UniProt P0AER8 · AlphaFold DB P0AER8
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