Research workbench
AlphaFold monomer V2.0 prediction for putative polypeptide N-acetylgalactosaminyltransferase 12 (Q8IA44)
Analyse AlphaFold monomer V2.0 prediction for putative polypeptide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8IA44
- Type
- protein
- Length
- 563 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3aEE739629077DbA5E2D0D9F4655D362a335420a
- Molecule
- Putative polypeptide N-acetylgalactosaminyltransferase 12
- UniProt
- Q8IA44
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 38% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative polypeptide N-acetylgalactosaminyltransferase 12 | protein | 563 | 38% helix, 22% strand | Q8IA44 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1153 | 0.79 | 0.80 | 108 | empty |
| 2 | 173 | 0.48 | 0.76 | 22 | empty |
| 3 | 98 | 0.38 | 0.76 | 17 | empty |
| 4 | 86 | 0.37 | 0.76 | 18 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8IA44
- Elsewhere: UniProt Q8IA44 · AlphaFold DB Q8IA44
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